Phylogeny and biogeography of Allium (Amaryllidaceae: Allieae) …
2010年1月1日 · Phylogenetic studies were based on sequence data of the nuclear ribosomal internal transcribed spacer (ITS) and chloroplast rps16 intron, analysed using parsimony and Bayesian approaches. Biogeographical patterns were conducted using statistical dispersal–vicariance analysis (S-DIVA).
Insights into phylogeny, age and evolution of Allium …
2020年4月1日 · In this study, a total of 39 complete chloroplast genomes of Allium (covering 12 Allium subgenera) were collected, and combining these with 125 species of plastomes from 19 other families of monocots, we reconstructed the phylogeny of the genus Allium, estimated the origin and divergence time of the three evolutionary lineages and investigated ...
Phylotranscriptomics reveals the phylogeny of Asparagales and …
2024年11月8日 · Asparagales, the largest monocot order, is renowned for its ecological, economic, and medicinal significance. Here, we leverage transcriptome data from 455 Asparagales species to explore the...
(PDF) Insights into phylogeny, age and evolution of Allium ...
2020年4月1日 · Results: Our phylogenetic analysis confirmed the monophyly and three evolutionary lineages of Allium, while new species relationships were detected within the third evolutionary lineage.
Insights into phylogeny, age and evolution of Allium ... - PubMed
2020年6月1日 · Our results detected a well-supported phylogenetic relationship of Allium. The PSGs and PSGs with high Ka/Ks values, as well as diversified morphologies, complicated chromosome characteristics and unique reproductive modes may play important roles in the adaptation and evolution of Allium species.
Flower morphology of Allium (Amaryllidaceae) and its systematic ...
2024年1月1日 · Phylogenetic tree was constructed with Bayesian inference posterior probability/maximum parsimony, which are given on each branch; maximum likelihood is shown below branches. Asterisks indicate maximum support values, bold asterisks indicate all maximum values of each values, and values lower than 50% are excluded.
Complete chloroplast genome sequences of four Allium …
2019年8月22日 · In this study, we present the use of complete chloroplast genome sequences in genome-scale phylogenetic studies of Allium. We sequenced and assembled four Allium chloroplast genomes and...
Incomplete lineage sorting and gene flow within Allium …
2024年6月1日 · In this study, we obtained 75 transcriptomes of 38 Allium species across 10 subgenera. Whole plastid genome, single copy genes and consensus CDS were generated to estimate phylogenetic trees both using coalescence and concatenation methods.
(PDF) Dated phylogeny, phylogeography, and classification of Allium ...
2024年6月11日 · Phylogenetic tree based on combined plastid fragments of the first evolutionary lineage of genus Allium. Numbers at nodes represent Bayesian posterior probabilities and bootstrap support...
[PDF] Insights into phylogeny, age and evolution of Allium ...
2020年4月1日 · In this study, the complete chloroplast genomes of nine species in the Allium sect. This study determined the complete plastomes of eight Ligusticum species using a de novo assembly approach and highlighted the advantage of plastome with mass informative sites in resolving phylogenetic relationships.